The detailed information of tRNA gene sequence


Sequence ID>WENV180096382
Genome IDMTBK01126650
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 47
End posion on genome 122
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcaacccgt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGTTGTTGGGGGTTCAAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctctcacccg
Secondary structure (Cloverleaf model)
>WENV180096382	Trp	CCA
                   t      GCCA ctctcacccg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     TTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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