The detailed information of tRNA gene sequence


Sequence ID>WENV180096384
Genome IDMTBK01126775
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2017
End posion on genome 1940
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gtttgcgtgt
tRNA gene sequence 
CGGGGTGTAGCTCAGTTTGGTATGAGCGCTACGTTGGGGACGTAGAGGCCGCTGGTTCAA
GTCCAGTCACTCCGACCA
Downstream region at tRNA end position 
tttatatttt
Secondary structure (Cloverleaf model)
>WENV180096384	Pro	GGG
                   t      ACCA tttatatttt
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G A C C     A
    T T G A        A      + | | | |     A
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    T A T          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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