The detailed information of tRNA gene sequence


Sequence ID>WENV180096387
Genome IDMTBK01127026
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4200
End posion on genome 4124
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagttagcgt
tRNA gene sequence 
CGGGGAGTGGCGCAGGTTGGTAGCGCGCATGGTTTGGGACCATGAGGTCGCAGGTTCAAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
cttcatttcc
Secondary structure (Cloverleaf model)
>WENV180096387	Pro	TGG
                   t      ACCA cttcatttcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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