The detailed information of tRNA gene sequence


Sequence ID>WENV180096388
Genome IDMTBK01127061
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 316
End posion on genome 242
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agcagtttcc
tRNA gene sequence 
GCCGTCTTAGCTCAGCGGTAGAGCACTCGCTTCACACGCGATAGGTCAGAAGTTCAAATC
TTCTAGACGGCACCA
Downstream region at tRNA end position 
ttttcaagaa
Secondary structure (Cloverleaf model)
>WENV180096388	Val	CAC
                   c      ACCA ttttcaagaa
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     T C T T C     A
        G A        A      | | | | |     A
      C     C T C G       A G A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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