The detailed information of tRNA gene sequence


Sequence ID>WENV180096394
Genome IDMTBK01127278
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 603
End posion on genome 531
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tactaagcac
tRNA gene sequence 
TGCGGGGTAGAGCAGTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCAGTGGTTCGAATC
CACTCCCCGCTACtc
Downstream region at tRNA end position 
aataagccgg
Secondary structure (Cloverleaf model)
>WENV180096394	fMet	CAT
                   c      ACtc aataagccgg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A C C     A
        G A        A      | | | | |     G
      T     C G A G       A G T G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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