The detailed information of tRNA gene sequence


Sequence ID>WENV180096395
Genome IDMTBK01127279
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 341
End posion on genome 427
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gtatcagcgt
tRNA gene sequence 
GCCGGGATGGCGGAATTGGCAGACGCGCTAGATTCAGGTTCTAGTGGGCGCAGGCTCGTG
CAGGTTCAAGTCCTGTTCCCGGCACCA
Downstream region at tRNA end position 
gtttccttat
Secondary structure (Cloverleaf model)
>WENV180096395	Leu	CAG
                   t      ACCA gtttccttat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCGCAGGCTCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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