The detailed information of tRNA gene sequence


Sequence ID>WENV180096402
Genome IDMTBK01127516
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 262
End posion on genome 337
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tatctagaat
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGACT
CTCCTCGTCTCCACCA
Downstream region at tRNA end position 
aattagaaat
Secondary structure (Cloverleaf model)
>WENV180096402	Ala	TGC
                   t      ACCA aattagaaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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