The detailed information of tRNA gene sequence


Sequence ID>WENV180096405
Genome IDMTBK01127663
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4138
End posion on genome 4064
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcacgagcag
tRNA gene sequence 
CGGGGTGTAGCGCAGCTTGGTAGCGCATCCGCTTTGGGAGCGGAAGGCCGCAGGTTCAAA
TCCTGTCACCCCGACgc
Downstream region at tRNA end position 
gcccgtaccg
Secondary structure (Cloverleaf model)
>WENV180096405	Pro	TGG
                   g      ACgc gcccgtaccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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