The detailed information of tRNA gene sequence


Sequence ID>WENV180096406
Genome IDMTBK01127688
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12113
End posion on genome 12039
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaatttcat
tRNA gene sequence 
GGCGAGGTAGCTCAGGTGGTTAGAGCGTCGGATTCATAACCCGAAGGTCACGAGTTCAAC
TCTCGTCCTCGCTACat
Downstream region at tRNA end position 
attaaccctg
Secondary structure (Cloverleaf model)
>WENV180096406	Met	CAT
                   t      ACat attaaccctg
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T G C T C     A
      G G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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