The detailed information of tRNA gene sequence


Sequence ID>WENV180096412
Genome IDMTBK01128163
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 800
End posion on genome 727
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatatattga
tRNA gene sequence 
GGCGCTATAGCCAAGTGGTAAGGCACAGGTCTGCAACACCTAGATCTCCAGTTCAAATCT
GGATGGCGCCTCCA
Downstream region at tRNA end position 
aaatattttt
Secondary structure (Cloverleaf model)
>WENV180096412	Cys	GCA
                   a      TCCA aaatattttt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     A - T          T A
                    T     A G G T C     A
        G A        A      | | | | |     A
      T     A C C G       T C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    C   A
                    A - T
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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