The detailed information of tRNA gene sequence


Sequence ID>WENV180096414
Genome IDMTBK01128229
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1315
End posion on genome 1388
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
catataattt
tRNA gene sequence 
ACCGATGTAGCTTAACGGTAGAGCGATGGTCTCCAAAACCATTGGTCGGGGTTCAATTCC
CCGCATCGGTGCCA
Downstream region at tRNA end position 
aaaaattgag
Secondary structure (Cloverleaf model)
>WENV180096414	Trp	CCA
                   t      GCCA aaaaattgag
                     A - T
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     G C C C C     A
        A A        A      | | | | |     A
      C     T T C G       C G G G G     C
      G     + | | |                 T T
      G     G A G C
        T A        G     TGGT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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