The detailed information of tRNA gene sequence


Sequence ID>WENV180096418
Genome IDMTBK01128388
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 597
End posion on genome 670
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttgtttattc
tRNA gene sequence 
GGGTGGTTAGCTCAGTTGGTTAGAGCGTTGCGTTGACATCGCAAAGGTCGTAGGTTCGAG
TCCTATACCACCCAttg
Downstream region at tRNA end position 
gaaatcattt
Secondary structure (Cloverleaf model)
>WENV180096418	Val	GAC
                   c      Attg gaaatcattt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          T G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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