The detailed information of tRNA gene sequence


Sequence ID>WENV180096419
Genome IDMTBK01128390
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12153
End posion on genome 12229
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aagtgcgcgg
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCGCCTGCTTCGGGAGCAGGAGGTCGCTGGTTCGAA
TCCAGTCGCTCCGACCA
Downstream region at tRNA end position 
ctgttaagtt
Secondary structure (Cloverleaf model)
>WENV180096419	Pro	CGG
                   g      ACCA ctgttaagtt
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    T       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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