The detailed information of tRNA gene sequence


Sequence ID>WENV180096428
Genome IDMTBK01128727
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 223
End posion on genome 148
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gccccgcgcc
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGTAGAGCGCCAGCTTTGCAAGCTGGATGCCGCCGGTTCGAGC
CCGGCTGCCTCCACCA
Downstream region at tRNA end position 
ccacggggtt
Secondary structure (Cloverleaf model)
>WENV180096428	Ala	TGC
                   c      ACCA ccacggggtt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C G
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGCC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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