The detailed information of tRNA gene sequence


Sequence ID>WENV180096429
Genome IDMTBK01128732
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 204
End posion on genome 279
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aacagcagat
tRNA gene sequence 
GGGGCATTAGCTCAGCTGGGAGAGCGCATGACTGGCAGTCATGAGGTCAGCGGTTCGATC
CCGCTATGCTCCACCA
Downstream region at tRNA end position 
tttttttagg
Secondary structure (Cloverleaf model)
>WENV180096429	Ala	GGC
                   t      ACCA tttttttagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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