The detailed information of tRNA gene sequence


Sequence ID>WENV180096436
Genome IDMTBK01129231
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2039
End posion on genome 1951
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaattaattt
tRNA gene sequence 
GGAGGCGTGTACCGAATCGGCTAAGGGGCCGGTCTCGAAAACCGGTGGGGTTTATCCCCG
TGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
taaaagaact
Secondary structure (Cloverleaf model)
>WENV180096436	Ser	CGA
                   t      GCCA taaaagaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
    T A A G        G      | | | | |     G
  C         C C A T       G T G G G     C
  G           |   +                 T T
  G         A G G G
    C T A          G     TGGGGTTTATCCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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