The detailed information of tRNA gene sequence


Sequence ID>WENV180096442
Genome IDMTBK01129691
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1028
End posion on genome 1104
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgccattact
tRNA gene sequence 
CGGGGAGTAGCTTAGCTTGGTAGAGCGCTTGCCTTGGGAGCAAGAGGTCGCAGGTTCAAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
ttcatgcgga
Secondary structure (Cloverleaf model)
>WENV180096442	Pro	TGG
                   t      ACCA ttcatgcgga
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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