The detailed information of tRNA gene sequence


Sequence ID>WENV180096445
Genome IDMTBK01129753
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 448
End posion on genome 359
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaatatt
tRNA gene sequence 
GGAGGGTTGTCCGAGAGGTCGAAGGAGATGGTCTCGAAAATCATTATACCCTTACGGGTA
TCTAGGGTTCAAATCCCTAACCCTCCGCCA
Downstream region at tRNA end position 
aaaattaagg
Secondary structure (Cloverleaf model)
>WENV180096445	Ser	CGA
                   t      GCCA aaaattaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     A T C C C     A
      A G A        G      | | | | |     A
    G       G C C T       T A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATACCCTTACGGGTATC
                    A - T
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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