The detailed information of tRNA gene sequence


Sequence ID>WENV180096451
Genome IDMTBK01129947
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 336
End posion on genome 428
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgctcaatgt
tRNA gene sequence 
GGAGGGTTGTCCGAGCTGGCTGAAGGAGCGCGACTGGAAATCGCGTGTGCCCCTACAAGG
GTACCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
atattgaaaa
Secondary structure (Cloverleaf model)
>WENV180096451	Ser	GGA
                   t      GCCA atattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T C G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTGCCCCTACAAGGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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