The detailed information of tRNA gene sequence


Sequence ID>WENV180096457
Genome IDMTBK01130154
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4318
End posion on genome 4407
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttacacc
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTAAAACCACCGGTTTGCTAAACCGGCGTACGGGTAATTCTG
TACCGGGGGTTCGAATCCCCCTCTCTCCGCtc
Downstream region at tRNA end position 
cggaaaaaaa
Secondary structure (Cloverleaf model)
>WENV180096457	Ser	GCT
                   c      GCtc cggaaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T A A        A     CGTACGGGTAATTCTGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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