The detailed information of tRNA gene sequence


Sequence ID>WENV180096459
Genome IDMTBK01130342
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 693
End posion on genome 769
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnncaa
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGTAGCGCGCTTGACTGGGGGTCAAGAGGTCGCAGGTTCAAA
TCCTGTCGCTCCGACCA
Downstream region at tRNA end position 
gggaataccc
Secondary structure (Cloverleaf model)
>WENV180096459	Pro	GGG
                   a      ACCA gggaataccc
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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