The detailed information of tRNA gene sequence


Sequence ID>WENV180096460
Genome IDMTBK01130414
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 339
End posion on genome 257
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
accacttttt
tRNA gene sequence 
GCGGATGTGTCGTAATTGGTAGCCGAGCAAGACTTAGGATCTTGTGCCTTCGGGCGTGGG
GGTTCGAGTCCCTTCATCCGCACac
Downstream region at tRNA end position 
gatagcctgc
Secondary structure (Cloverleaf model)
>WENV180096460	Leu	TAG
                   t      ACac gatagcctgc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       T G C T       G G G G G     C
    G         | | |                 T T
    G       C C G A
      T A G        G     TGCCTTCGGGCGT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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