The detailed information of tRNA gene sequence


Sequence ID>WENV180096481
Genome IDMTBK01131387
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1025
End posion on genome 1100
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agaggaatgt
tRNA gene sequence 
GGGGACGTAGCTCAGTTGGGAGAGCGCGTGAATGGCATTCATGAGGTCGTGGGTTCGAAT
CCCATCGTCTCCACCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV180096481	Ala	GGC
                   t      ACCA ttttttttat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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