The detailed information of tRNA gene sequence


Sequence ID>WENV180096482
Genome IDMTBK01131490
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 104
End posion on genome 30
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caggcatcgg
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGCCTGCAAAGCCTTTATACCCCGGTTCAAATC
CGGGTGCCGCCTCCA
Downstream region at tRNA end position 
tttcttttta
Secondary structure (Cloverleaf model)
>WENV180096482	Cys	GCA
                   g      TCCA tttcttttta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATAC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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