The detailed information of tRNA gene sequence


Sequence ID>WENV180096487
Genome IDMTBK01131678
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 212
End posion on genome 136
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttttttaact
tRNA gene sequence 
GGATCCGTAGCTCAGTTGGCGAGAGCGCCCGGCTTACATCCGGAAGGTCACAGGTTCAAA
TCCTGTCGGATCCACCA
Downstream region at tRNA end position 
gcccatgata
Secondary structure (Cloverleaf model)
>WENV180096487	Val	TAC
                   t      ACCA gcccatgata
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C G A        G     AGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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