The detailed information of tRNA gene sequence


Sequence ID>WENV180096490
Genome IDMTBK01132039
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5512
End posion on genome 5587
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atggtgcagc
tRNA gene sequence 
GGCCCCATCGTCTAGCGGTTCAGGACACCGCCCTCTCACGGCGGAGACACGGGTTCGAAT
CCCGTTGGGGCTGCCA
Downstream region at tRNA end position 
atattttaac
Secondary structure (Cloverleaf model)
>WENV180096490	Glu	CTC
                   c      GCCA atattttaac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T C A        A     AGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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