The detailed information of tRNA gene sequence


Sequence ID>WENV180096493
Genome IDMTBK01132332
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 624
End posion on genome 700
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acggcggttg
tRNA gene sequence 
GGGCGGCTAGCTCAGTTGGTTAGAGCGCTGCTTTCACACGGCAGAGGCCACTGGTTCGAG
TCCAGTGCCGCCCACCA
Downstream region at tRNA end position 
tattctttcc
Secondary structure (Cloverleaf model)
>WENV180096493	Val	CAC
                   g      ACCA tattctttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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