The detailed information of tRNA gene sequence


Sequence ID>WENV180096494
Genome IDMTBK01132371
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1313
End posion on genome 1387
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tatctatatc
tRNA gene sequence 
GGTCCCATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGGGGTCCTAGGATCATG
CCCTAGTGGGACCACaa
Downstream region at tRNA end position 
aagcctcttt
Secondary structure (Cloverleaf model)
>WENV180096494	Ile2	CAT
                   c      ACaa aagcctcttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G A T C C     T
      T G A        A      | | | | |     A
    T       C T C G       C T A G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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