The detailed information of tRNA gene sequence


Sequence ID>WENV180096501
Genome IDMTBK01132872
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 431
End posion on genome 359
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
catttaatcc
tRNA gene sequence 
GGGCCCATAGCGCAGCTGGGAGCGCGTCTCAATGGCATTGAGAAGGTCGGGGGTTCGAAT
CCCCCTGGGTCCAttt
Downstream region at tRNA end position 
ttatttttaa
Secondary structure (Cloverleaf model)
>WENV180096501	Ala	GGC
                   c      Attt ttatttttaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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