The detailed information of tRNA gene sequence


Sequence ID>WENV180096503
Genome IDMTBK01132924
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 83
End posion on genome 159
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cccggctcaa
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCGCCGGTTCAAA
TCCGGCCGAGCCCACCA
Downstream region at tRNA end position 
tctccttttg
Secondary structure (Cloverleaf model)
>WENV180096503	Val	GAC
                   a      ACCA tctccttttg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | | | | |     A
    T       T C T G       G C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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