The detailed information of tRNA gene sequence


Sequence ID>WENV180096504
Genome IDMTBK01132960
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 621
End posion on genome 534
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcatc
tRNA gene sequence 
GGAGAAATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGAACCGAGAGGTTCC
GGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
aacagttaaa
Secondary structure (Cloverleaf model)
>WENV180096504	Ser	TGA
                   c      GCCA aacagttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAACCGAGAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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