The detailed information of tRNA gene sequence


Sequence ID>WENV180096507
Genome IDMTBK01133076
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 16
End posion on genome 89
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcttatctcT
tRNA gene sequence 
GGGCCTGTAGATCAGGGGTAGATCGCAGCGTTCGCAACGCTGAGGCCGCGGGTTCAAATC
CCGCCGGGTCCATtc
Downstream region at tRNA end position 
ttattttgat
Secondary structure (Cloverleaf model)
>WENV180096507	Ala	CGC
                   T      ATtc ttattttgat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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