The detailed information of tRNA gene sequence


Sequence ID>WENV180096515
Genome IDMTBK01133728
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 749
End posion on genome 821
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acaaacagcc
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACGCCGGGTTCTCAGCCCGGTAACAGGGGTTCGACT
CCCCTTGGGGGTAtcc
Downstream region at tRNA end position 
gtaagtgctt
Secondary structure (Cloverleaf model)
>WENV180096515	Glu	CTC
                   c      Atcc gtaagtgctt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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