The detailed information of tRNA gene sequence


Sequence ID>WENV180096516
Genome IDMTBK01133872
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1501
End posion on genome 1427
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaataagtga
tRNA gene sequence 
GGGCAATTAGCTCAGTTGGTTAGAGCGCAACACTGATAATGTTGAGGTCGGAGGTTCAAC
TCCTCCATTGCCCACtc
Downstream region at tRNA end position 
attatcgcgg
Secondary structure (Cloverleaf model)
>WENV180096516	Ile	GAT
                   a      ACtc attatcgcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          T C
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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