The detailed information of tRNA gene sequence


Sequence ID>WENV180096528
Genome IDMTBK01134450
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 386
End posion on genome 469
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgtttgccc
tRNA gene sequence 
GGAGGGGTAGCCTAATTGGTAAGGCACCGGTCTTGAAAACCGGCGGTTTCGGCCTTGCGG
GTTCGAGTCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
gattttattg
Secondary structure (Cloverleaf model)
>WENV180096528	Ser	TGA
                   c      GCCA gattttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        A      | | | | |     G
    T       T C C G       G C G G G     C
    G       | | | |                 T T
    G       A G G C
      T A          A     CGGTTTCGGCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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