The detailed information of tRNA gene sequence


Sequence ID>WENV180096532
Genome IDMTBK01134672
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 119
End posion on genome 44
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taattatctt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGCAGAGCATCGGTCTCCAAAACCGAGGGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
tatttaaaaa
Secondary structure (Cloverleaf model)
>WENV180096532	Trp	CCA
                   t      GCCA tatttaaaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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