The detailed information of tRNA gene sequence


Sequence ID>WENV180096535
Genome IDMTBK01134994
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 245
End posion on genome 318
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gttaaattcg
tRNA gene sequence 
GCTGGTGTAGCTCAATCGGCAGAGCAGCTGATTTGTAATCAGCAGGTTGCGGGTTCGAGT
CCCATCACCAGCTCat
Downstream region at tRNA end position 
ggagaggttc
Secondary structure (Cloverleaf model)
>WENV180096535	Thr	TGT
                   g      TCat ggagaggttc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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