The detailed information of tRNA gene sequence


Sequence ID>WENV180096540
Genome IDMTBK01135295
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3685
End posion on genome 3608
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gataaaaatt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTTAGCGCACTGGTTTTGGGAACCAGGAGTCGGAGGTTCAA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
taataaaaag
Secondary structure (Cloverleaf model)
>WENV180096540	Pro	TGG
                   t      ACCA taataaaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GAGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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