The detailed information of tRNA gene sequence


Sequence ID>WENV180096543
Genome IDMTBK01135299
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 706
End posion on genome 780
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgacccccg
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTCAGAGCATCCGGCTCATAATCGGAAGGTCATCGGTTCGAT
CCCGATCGCCGCTACag
Downstream region at tRNA end position 
cagtgacaat
Secondary structure (Cloverleaf model)
>WENV180096543	Met	CAT
                   g      ACag cagtgacaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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