The detailed information of tRNA gene sequence


Sequence ID>WENV180096549
Genome IDMTBK01135504
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1237
End posion on genome 1149
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctctaaatcc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGCTTAAGGAGCTGGTCTTGAAAACCAGTGACTCCGTAAGGGGC
CGCGGGTTCAAATCCTGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaataatatt
Secondary structure (Cloverleaf model)
>WENV180096549	Ser	TGA
                   c      GCCA aaataatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | + | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGACTCCGTAAGGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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