The detailed information of tRNA gene sequence


Sequence ID>WENV180096550
Genome IDMTBK01135504
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1069
End posion on genome 978
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggtttaaaaa
tRNA gene sequence 
GGAGAAGTACTCAAGTCGGCTGAAGAGGATGGTTTGCTAAACCATTAGATCGTGTAAGCG
ATGCGCGGGTTCGAATCCCGCCTTCTCCGCCA
Downstream region at tRNA end position 
ttatttacta
Secondary structure (Cloverleaf model)
>WENV180096550	Ser	GCT
                   a      GCCA ttatttacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C G C C C     A
    C T G A        A      | | | | |     G
  G         A C T C       G C G G G     C
  G           | | |                 T T
  C         A G A G
    T G A          G     TAGATCGTGTAAGCGATGC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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