The detailed information of tRNA gene sequence


Sequence ID>WENV180096556
Genome IDMTBK01135567
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 826
End posion on genome 903
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ggtgtctgga
tRNA gene sequence 
CGGGCAGTAGCGCAGCCTGGTTAGCGCACTTGACTGGGGGTCAAGGGGTCGGAGGTTCGA
ATCCTCTCTGCCCGACCA
Downstream region at tRNA end position 
ttctctcttc
Secondary structure (Cloverleaf model)
>WENV180096556	Pro	GGG
                   a      ACCA ttctctcttc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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