The detailed information of tRNA gene sequence


Sequence ID>WENV180096575
Genome IDMTBK01136320
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1167
End posion on genome 1091
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcaagctaat
tRNA gene sequence 
GCGCCAGTAGCTCAGTAGGATAGAGCAGCAGCCTTCTAAGCTGCGGGTCAGGGGTTCGAA
TCCCTTCTGGCGTGCCA
Downstream region at tRNA end position 
gatttttaaa
Secondary structure (Cloverleaf model)
>WENV180096575	Arg	TCT
                   t      GCCA gatttttaaa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | + | | |     G
    A       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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