The detailed information of tRNA gene sequence


Sequence ID>WENV180096585
Genome IDMTBK01136913
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8201
End posion on genome 8113
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnngaacct
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTGTGGGACTTGTGCCC
ACCGTGGGTTCGAATCCCACTCTCTCCGCtg
Downstream region at tRNA end position 
atgaaggttt
Secondary structure (Cloverleaf model)
>WENV180096585	Ser	CGA
                   t      GCtg atgaaggttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGGACTTGTGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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