The detailed information of tRNA gene sequence


Sequence ID>WENV180096596
Genome IDMTBK01137669
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4388
End posion on genome 4462
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaaatt
tRNA gene sequence 
GCGCCCATAGCTCAGTTGGTTAGAGCAACTGACTCATAATCAGTAGGCCCCTGGTTCAAG
TCCAGGTGGGCGCACaa
Downstream region at tRNA end position 
tccagcgatt
Secondary structure (Cloverleaf model)
>WENV180096596	Ile2	CAT
                   t      ACaa tccagcgatt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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