The detailed information of tRNA gene sequence


Sequence ID>WENV180096604
Genome IDMTBK01138080
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 162
End posion on genome 89
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggctcttagc
tRNA gene sequence 
GCCTCGATAGCTTAGCCCGGTATAGCGCGTCCTTGGTAAGGACGAGGTCGCGGGTTCGAA
TCCCGTCCGAGGCTtaa
Downstream region at tRNA end position 
ttttcagttt
Secondary structure (Cloverleaf model)
>WENV180096604	Thr	GGT
                   c      Ttaa ttttcagttt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A   C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    C       T T C G       G C G G G     C
    C         | | |                 T T
    G       T A G C
      G T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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