The detailed information of tRNA gene sequence


Sequence ID>WENV180096607
Genome IDMTBK01138428
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 35
End posion on genome 111
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtcttcacgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTTCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCCACCA
Downstream region at tRNA end position 
tctgaaatgc
Secondary structure (Cloverleaf model)
>WENV180096607	fMet	CAT
                   c      ACCA tctgaaatgc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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