The detailed information of tRNA gene sequence


Sequence ID>WENV180096617
Genome IDMTBK01138777
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 112
End posion on genome 200
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgatattg
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCATAACGGAACGGTCTTGAAAACCGTCGTACCGAGAGGTAC
CGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
taaagtcagc
Secondary structure (Cloverleaf model)
>WENV180096617	Ser	TGA
                   g      GCCA taaagtcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          A     CGTACCGAGAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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