The detailed information of tRNA gene sequence


Sequence ID>WENV180096618
Genome IDMTBK01138777
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 253
End posion on genome 343
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattttttt
tRNA gene sequence 
GGAGAAGTACTCAAGTTGGTGAAGAGGCACCCCTGCTAAGGGTGTAGGTCGGGGAACCGG
CGCGGGAGTTCGAGTCTCCCCTTCTCCGCCA
Downstream region at tRNA end position 
agcggttgta
Secondary structure (Cloverleaf model)
>WENV180096618	Ser	GCT
                   t      GCCA agcggttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C C C T C     A
      T G A        A      | | | | |     G
    T       A C T C       G G G A G     C
    G         | | |                 T T
    G       A G A G
      T G A        G     TAGGTCGGGGAACCGGCGC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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