The detailed information of tRNA gene sequence


Sequence ID>WENV180096619
Genome IDMTBK01138799
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2095
End posion on genome 2023
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaataatat
tRNA gene sequence 
TGCGGGGTAGAGCAGAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGTC
CTGCCCCCGCTACta
Downstream region at tRNA end position 
atcacatttc
Secondary structure (Cloverleaf model)
>WENV180096619	fMet	CAT
                   t      ACta atcacatttc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
        G A        A      | | | | |     G
      A     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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